Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRWALDVAFLWKAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMTMLHLAVIFLFSALSRALVQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGIRWTLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPDLELLLRSSQREEGDNEEEEYFVAQGQQ |
| 2GRV Chain:A ((75-104)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSRWELDTTLLESAEVTQENPFTVTYKIRPEAQWTDNAPIAADDYWYLWRQMVSQPGVVDPAGYDLITGVQSVEGGKQAVVTFSQPYPAWRELFNDILPAHIVKDIPGGFGAGLARAMPVTGGQFRVETIDPQRDEILLARNDRFWSVPAKPDLVLFRRGGAPAALADSIRNGDTQVAQVHGGAATFAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GRV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4541 for 115 contacts (-39.5/contact) +
2D Compatibility (PS) -3206 + (NN) -306 + (LL) 17740
1D Compatibility (HY) -1600 + (ID) 550
Total energy: 7537.0 ( 65.54 by residue)
QMean score : -0.462
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