Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEAARTAVLRVKRKRSAEPAEALVLACKRLRSDAVESAAQKTSEGLERAAENNVFHLVATVCSQEEPVQPLLREVLRPSRDSQQRVRRNLRASAREVRQEGRYRVLSSRRSLGTTSSGQESEYTPGNPEAAGNSGFQLLDLVHEEGEPEAASAGSCKTSDPDVILCNSVELI---RERLTVSEDGPGVRRQ--------EEQKHDDYVYDIYYLETATPGWIENILSVQPYSQEWELVNDDQEPEDIYDDEDDENSENNWRNEYPEEESSDGDEDSRGSADYNSLSEEERGSSRQRMWSKYPLDVQKEFGYDSPHDLDSD |
4FCA Chain:A ((161-250)) | ---------------------------------------------------------------------------------------------------------------------------------------------------PETV-AEHLKQEDPAALLKKHDEIINIEHKMSGLSKDGAGVANQGKHSIHFVEDWYTDDYMYATYYRTAYSKGNLESVLNLE------ELTNDGWGPWHEVGHQHQQDTWLWDGLGEVTVNIYSLAVQTTFGHKTRLEQEGRYEAAFAYLGKPDAQEKMNEFEKLVMFWQLHL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13356 for 440 contacts (30.4/contact) +
2D Compatibility (PS) -8620 + (NN) -6774 + (LL) 10852
1D Compatibility (HY) -3600 + (ID) 1500
Total energy: 3714.0 ( 8.44 by residue)
QMean score : 0.252
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