Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAWPNVFQRGSLLSQFSHHHVVVFLLTFFSYSLLHASRKTFSNVKVSISEQWTPSAFNTSVELPVEIWSSNHLFPSAEKATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSALVVFVFGALTEWLRFYNKWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGN-------ILGACLASSVLQYGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSGIEAEENFEEDSHRPLINGGENEDEYEPNYSIQDDSSVAQVKAISFYQACCLPGVIPYSLAYAC--LKLVNYSFFFWLPFYLSNNFGWKEAEADKLS---IWYDVGGIIGGTLQGFISDVL---QKRAPVLALSLLLAVGSLIGYSRSPNDKSINALLMTVTGFFIGGPSNMISSAISADLGRQELIQRSSEALATVTGIVDGSGSIGAAV-GQYLVSLIRDKLGWMWVFYFFILMTSCTIVFISPLIVREIFSLVLRRQAHILRE |
| 1PW4 Chain:A ((75-448)) | ---------------------------------------------------------------------------------------------AYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMG-FVPWATSSIAVMFVLLFLC-GWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFA-----FAMMRDTPQSCGLPPIE-----------------EYKND----------------TAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEV---KHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLI--------GLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGG---FMVMIGGSILAVILLIVVMIGE--KRRHEQLLQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222358 for 2587 contacts (-86.0/contact) +
2D Compatibility (PS) -34374 + (NN) -147 + (LL) 10200
1D Compatibility (HY) -28400 + (ID) 4900
Total energy: -279979.0 ( -108.23 by residue)
QMean score : 0.201
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