Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAKEKQHLLDARPAIRSYTGSLWQEGAGWIPLPRPGLDLQAIELAAQSNHHCHAQKGPDSHCDPKKGKAQRQLYVASAICLLFMIGEVVEILGALVSVLSIWVVTGVLVYLAVERLISGDYEIDGGTMLITSGCAVAVNIIMGLTLHQSGHGHSHGTTNQQEENPSVRAAFIHVIGDFMQSMGVLVAAYILYFKPEYKYVDPICTFVFSILVLGTTLTILRDVILVLMEGTPKGVDFTAVRDL----LLSVEGVEALHSLHIWALTVAQPVLSVHIAIAQNTDAQAVLKTASSRLQGKFHFHTVTI----QIEDYSEDMKDCQACQGPSD |
| 3BDL Chain:A ((279-405)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVESMDKAGNFIGWLHIDGANLSVL------LVEHALSKVHFTAERSSYYKSLLSAEEAAKQKKEKVWA----------MPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BDL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15654 for 502 contacts (-31.2/contact) +
2D Compatibility (PS) -11721 + (NN) -4322 + (LL) 16056
1D Compatibility (HY) -3600 + (ID) 1350
Total energy: -20591.0 ( -41.02 by residue)
QMean score : -0.015
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