Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKKILGLLGLALAAAFVLTACGQKNDKNTLTVGVMTMTDSDKERWDKIEELLKKENIKLKFKEFTDYSQPNKALKNGEIDINSFQHYNFLNNWNKENKGDLVTVAETYISPINLFSGTENGKAKYSSAKEIPNGGQIAIPNDATNESRALYVLQDAGLIKLNVSGDE-LATVKNIKSNPKNLDI-KEVDAS--QTARNLASVDAAVVNNSYAVPAKIDFK---TSLYKEKVNEGSKQWINIIAAQKNWKKSKKAAAIKKLIKAYHTDAVKKVIKKTAKGVDEPVW |
| 4EF1 Chain:A ((2-244)) | ---------------------------DDSVLKVGASPVPHA--EILEHVKPLLEKEGVKLEVTTYTDYVLPNKALESGDIDANYFQHVPFFNEAVKENDYDFVNAGAIHLEPVGLYS------KKYKSLQEIPDGSTIYVSSSVSDWPRVLTILEDAGLITLKEGVDRTTATFDDIDKNTKKLKFNHESDPAIMTTLYDNEEGAAVLINSNFAVDQGLNPKKDAIALEKE-----SSPYANIIAVR---KEDENNENVKKLVKVLRSKEVQDWITKKWNGAIVPV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EF1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24753 for 1952 contacts (-12.7/contact) +
2D Compatibility (PS) -25039 + (NN) -11676 + (LL) 2764
1D Compatibility (HY) -15600 + (ID) 4350
Total energy: -78654.0 ( -40.29 by residue)
QMean score : 0.382
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