Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKRLLTVAAFALAGCVTVVAQDKKKEFKMPTGYAGITHEMSEFYEPVPPVVTPGTDLKGGGFTAPSDAIVLFDGKDLSAWESVKGGAAE--------WDVHDGVFTVNKKKGDIQTKQKFNDFQMHIEWQ--VPTNITGESQSRGNSGIFLQGMYEVQVLDCYNNPTYVNGQ----TGSIYKQSIPLAN-AMRKPGEWNVYDIIYTAPTFK--EDGSYRTHPTVTVIQNGVVLQNHTTILGTTEWIGFPQVKKHGAGPIILQ-SHGDPSEPISFRNIWIREL |
| 3IMM Chain:A ((5-201)) | ------------------------------------------------------------------------------NKWKPLFGKNLENANYNPEVWSETDGVLGAVKDES-IWTKDEYENFELDLDFKTDVGTN-SGVVVYCTDTKDWIPNSVEIQIADDHCE-KWGNGKPYEKCGAIYGHLGAVQDKVVKKPGEWNHMRIKCAGQHIMVILNGKKVTEMDMSKWTSGTKNPDGSDI---PSWLPKPFAELPTKGFIGLQGKHGDSL--IWFRNIKIRSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21943 for 1322 contacts (-16.6/contact) +
2D Compatibility (PS) -19061 + (NN) -3929 + (LL) 4444
1D Compatibility (HY) -7600 + (ID) 2600
Total energy: -50689.0 ( -38.34 by residue)
QMean score : 0.186
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