Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEVKSLLMVMATLTIAGCSQNEMTEMNPDTNRTIGLDVYTEVQTRGTETTTSTLKANAGFGIFAYQTSSAGWNSEKGNTTPNFMYNEHATWTSDSWGYTNLRFWPIDDKKITFFAYAPYESKPEVGTDQKITLSGQNAKGAPTITFEVKT-SNNWKDMIDLVTDCHTAIQDQTNESNKGTVQFK-FSHVLTQIANIKVKPDVNLGT-DTKIFVTGLKLDPGSTTLYNKAVYKFDNDTWEAISPDASYFSTEQDLSDFLNKTTTDQWGYNKSSINVSDDQNATAL-FSDTEALYFIPVNNKNGTTNAGDLKLKINYDI-VTKVTDTSNLTSTITNKEVSLPKNTFKKGTKHTYVLTIKMNAIKITVEDNMEGWTDDSDSDINVEK |
| 3T2L Chain:A ((17-297)) | --LRVPLQVSSAVIKQEVVTRLAPDPVPLTEGAIGIFLSGTEPEDSGYKVIDNRKYVYSEGHWGPPTAND--------------------------------TIYLVGNDADVCAYYPY--KDSYTDKTVIPLQSQDYVETEDIYYALNTMING----------------------FTPAITFDMVH----AYSLVELKISRENYFMPCEISKITLKN----SNLIKKGTINIAVDG----------SIHSSETGNYDLTTVTDA---SPHTLSVGESYVCRVLMIPVPLKIERTD---AEGGEFGLSVSLVIDGQQMLVEIPYSEL--------------GEFRQGEKYVIGLKIKGTEIVPT--VKALEWEDE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T2L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31112 for 1877 contacts (-16.6/contact) +
2D Compatibility (PS) -28209 + (NN) -86 + (LL) 4856
1D Compatibility (HY) -7200 + (ID) 2300
Total energy: -64051.0 ( -34.12 by residue)
QMean score : 0.157
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