Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGHHHHHHSHMQQAISEKDRGNGFFKEGKYERAIECYTR---------GIAADGANA----LLPA--NRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTARTFLGKLNEAKQDFETVLLLEPGNKQAVTELSKIKK
1KT0 Chain:A ((265-396))
----------LEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVN----AARLQISMCQK
General information:
TITO was launched using:
RESULT:
Template:
1KT0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4509 for 797 contacts (5.7/contact) +
2D Compatibility (PS) -12287 + (NN) -5201 + (LL) -12
1D Compatibility (HY) -8400 + (ID) 2150
Total energy: -23541.0 ( -29.54 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_1KT0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KT0-query.scw
PDB file :
Tito_Scwrl_1KT0.pdb
: