Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKMEKKWPFVFNGIVIFCLILLILGMRWQAK--------KEESEVLNVTESLQKESEITSFSEEEEAVLYMLSALKKNDLDMALRGCAIDETALQINFVKTAEELPGMQLIDLPAPTSDYSYYFPLTSAEMTKAYIEQFEELSTEIPE--IETLEVLEIAEKKEKEREEQLAECLAAQEVSELEIYVKCGEQSYRLGFTAVQYEKNWKIHSLKEGLLYETDIPACVQMEEMREAKKTYVLPNQLTGANYFQAMPISEKTPQRAVEQFIYAIEKGDLTRALAFATTESSQDTSPELLKKQGEYAKELKTMLYGFLGTEDARLYGKSEEQLNKLRGKLNPEYMVYLDLIKVIPIETEENTETVKQYAGLYSYNGKNYLTGYTLCRQEDGWQIQSLSAPALSLESGEVMRLSKEESRKTSEQSVLKAEKNER |
2XID Chain:A ((577-718)) | -----------------------LIGTQWHPEDLVDIIRMEDKK-------NLTLRKTVTGLAGDRTKDFHFEIELKNNKQELLSQTVKTDKTNLEFKDGKATINLKHGESLTLQGLPEGYSYLVKETDSEGYKVKVNSQEVANATVSKTGITSDETLAFENNKE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2XID.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -8825 for 791 contacts (-11.2/contact) +
2D Compatibility (PS) -12208 + (NN) 8570 + (LL) 23468
1D Compatibility (HY) -2800 + (ID) 1250
Total energy: 6955.0 ( 8.79 by residue)
QMean score : 0.009
|
|
|