Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------MDTQQLYFLNDIGK--QKPESIRNRSAACPFCDRENLTDILAT--------------EGSIIWLKNKFPTLKDTFQTVLIETDNCEDHIATYTEEHMRSLIRFSI-----KHWLNLQKNEEFTSVILYKNHGPFSGGSLHHAHMQIIGMKYVNYLDNVEQDNFQGVIVQKNEHIELNISDRPI-IGFTEFNIIIEDIGCIDELANYIQQTVRYILTDFHKGCSS-----YNLFFYYLNEKIICKVVPRFVVSPLYVGYKIPQVSTKIEDVKIQLAAYFTKQND------AIIHKKIE- |
| 1U7L Chain:A ((5-392)) | LYTANDFILISLPQNAQPVTAPGSKTDSWFNETLIGGRAFVSDFKIPEFKIGSLDTLIVESEELSKVDNQIGASIGKIIEILQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAERKKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQEFTTAAREKKFIPREFNYSEELIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFHIKALRVYVESVLRYGLPPHFNIKIIAVPPKNLSKCKSELIDAFGFLGGNAFMYEPFVMYIINL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U7L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84584 for 1656 contacts (-51.1/contact) +
2D Compatibility (PS) -26944 + (NN) 3206 + (LL) 0
1D Compatibility (HY) -800 + (ID) 1550
Total energy: -110672.0 ( -66.83 by residue)
QMean score : 0.193
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