Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYTLFEIGPFALDSFGWKETIPPKKDGDSEKVVRMASPIIVNARFSDPITGVEKLIITNNNGKKDIFESDILTTRNLPSLIKYGYSINEKYIR-SLSYALQLMRDRLPLSELYEGVGILETPFGYLISLDKVLKSIQFNQSSPSYPIVDSAYDLTPKGTFDNWFNMYIDEVKGHLLLELAVIFGISALVTSFLKHKHEIEFAGILFSFTGQSSTGKSTAAALAVSVAGNPTKGNETLFRSWN-ATRNALEGYLSNNYGIPIVFDELSSTTLRDTTG-LLYSIAEGQGRQRSNVHGE-VKTPKNWGTSVISTSEYSIFNDSAQNDGLRVRTIEINEQFTTNATNADNIKKAVALNYGHVLPLVAKYLINREDEVIQWFYKEVDWFEAKLKDETNNTGIRMFKRYAVITTSAKILGRVLSTDIDIANIRD-YFIDYHT-HTVSERSLADKAIDVIIQFVAQNRGKFSDEGALKNMFENYGLISLKDDHIEVKII-ANVFKQMLN-NHQFQDVNNVVNALRDKGF-IL-ADRGRQTTKRSVKDNSGKKQSLVFYHLKLDVEFASILGLTKDKSLLQNWTPSNDNKAAKELFKSANEGIGPSGVHEDF |
| 3TVI Chain:A ((4-438)) | IVVTKFG-GSSLADSNQFKKVKGIIDSDANRKYIIPSAP----GKRTNKDYKITDLLYLCNAHVK---NGIPFDDVFKLISQRYTEIVSELNIDMDIAYYLEKVKKNIENGASSDYAASRGEYLNGVILAKYL---------NAEFIDAAEVIFFDKCFDEKKSYEKIKEKVLSCNKAVIPGFYGSS-------FNGDVKTF----------SRGGSDVTGSIISAGVNADLYENWTDVSGFLMADPRIVEN--------PKTISKISYKELRELSYMLHEEAIFPVKDSGIPINIKNTNKPSDPGTLILSDTHKE-------------------------------------------------------------------------INLGTITGIAGKKNFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMPS---------GVDSVSLVIEDCKLDGKCDKIIEEIKKQ-----CNPDSIEIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGSS-------------------------EINVIVGVE----------TVDFEKAVKSIYNAFN------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TVI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37108 for 3425 contacts (-10.8/contact) +
2D Compatibility (PS) -43705 + (NN) -4181 + (LL) 12272
1D Compatibility (HY) -5600 + (ID) 3250
Total energy: -81572.0 ( -23.82 by residue)
QMean score : 0.142
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