Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------MNIKKLFSIFTLVILVFATACTNKSEKATVSDTNEKPKEEIKIVEPNGAEKTKLNLNFGV-GKLNISGNEEKLMKGKFIYSENEWKP---EIKYEVKDKDGELEISQPGLKSGNVSLNNKRNEWNINL---NEKIPTEIKLSLGTGEFKADLSKINLKELNVGMGVG---KVDLDISGNYKN--NVKVNIEGGVGEATVYLPKSIGVKIKAEKGVGAVNANGFIVEGENIYKNSQYGKSKNSIEVNIEAGVGAINIKQK--------- |
| 3SHS Chain:A ((2-304)) | AFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNTATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAE---LIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQ-DITIQEFT-ADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVAKLYQQIEDETVEVAASTSRKCSMEVVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 32650 for 1474 contacts (22.2/contact) +
2D Compatibility (PS) -24909 + (NN) 6532 + (LL) 216
1D Compatibility (HY) -3600 + (ID) 1750
Total energy: 9139.0 ( 6.20 by residue)
QMean score : 0.122
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