Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | GALTAQGASFFTAAPLSYNTGNSTISLDYRSPQLRVSGGALALTS------PVFVYQTPFN----TPMRLRNGTYNEYADAHIQMVRFGTTVLFNIDVTGETNATGTQTWELQFDG-TLGSCLTGRMQVMGGTGEELDVTPTFILPTSDKSVYKQGFMPIVCSENGEFKQSTYCSYALTYR--LGNFYITLKSTTSGCKPIFQMSFMYESQIGIV |
4J2K Chain:A ((20-160)) | ------------------------------LPALRGKGGGLELAKTGDETCPLNVVQARSETKRGRPAIIWT--PP-----RIAILTPAFYLNIEFQTRDLPAC-LEEYSRLPWKVEGE-----SQEVKIAPKEEEQHLFGSFKIKPYRD-DYKLVYCE-------------SCKDLGISIDDENNRLLVVK----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J2K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48865 for 790 contacts (-61.9/contact) +
2D Compatibility (PS) -12865 + (NN) -3614 + (LL) 3988
1D Compatibility (HY) -2000 + (ID) 1050
Total energy: -64406.0 ( -81.53 by residue)
QMean score : 0.169
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