Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTSVWGKSILALVFTFMCSLAISAASPKDYLYDTKEENGKIISKVVFLQENGLLNKQVRYEFQYNENGKVSEKKAFRWDRTNDEWVPFYQITYQYDDQSGEIKTNYGMWDKKKKNFSLNVQNMIIPSTNYEEIFS
3WHU Chain:A ((127-220))
-------------------------------FFDSFDNDGKKNNPAIVIIGN---NGQIHYDHQ--NDGASQALASCQRDFRNKPYPVRAKITYYQNTLTVMINNGF-TPDKNDYEFCAKVENMIIPAQGH-----
General information:
TITO was launched using:
RESULT:
Template:
3WHU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 38394 for 567 contacts (67.7/contact) +
2D Compatibility (PS) -9723 + (NN) -1542 + (LL) 3184
1D Compatibility (HY) -1600 + (ID) 1200
Total energy: 27513.0 ( 48.52 by residue)
QMean score : 0.077
(partial model without unconserved sides chains):
PDB file :
Tito_3WHU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WHU-query.scw
PDB file :
Tito_Scwrl_3WHU.pdb
: