Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGLLSNFRNTIIVSFVLALVIVIGYGHSPHGHDATYFQAIFRWLHVLFGILWIGLLYYFNFVQIRVMPQIPAELKPAVSKYIAPEALFWFRWAALATWVMGVLLAYNRGYLVEAFTLGLAGGYTPGVDMG--FTFIGTGMWLATVMFFNVWVFIWPNQKIALGIVEADADAKAKAAKTAMLVSRTNTLLSIPMLATMAMHQTLFG |
3DWH Chain:A ((37-73)) | ---------------------------------------------------------------------------------------------------VAGIHGRSNDG----AYSLVLAGGYEDDVDHGNFFTYTGSG------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12602 for 136 contacts (-92.7/contact) +
2D Compatibility (PS) -4007 + (NN) -2641 + (LL) 16676
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -4674.0 ( -34.37 by residue)
QMean score : -0.029
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