Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEPIILRYFPVLGRAQALRHALADAELAFRDLRIPLEQWSQHKDSDAGGPYGSLPTLRWHGVEVAETIAIASFLARSLGHYEGRDNGEIARLEAVVSLCYTEVSLQIAQLLWLDLFNPGVDLAAAVPLQFGRLVARLTRLEAHTPEAGWFGGERPVMADYFAAEAIEALRYLLGREHDDALRTRLPHLCALARRMAQRPALAQAWSTRPQTFTAHPDEAAMLERLRALPLAATIGASME
3O76 Chain:A ((2-197))
---PYTIVYFPVRGRCEAMRMLLADQGQSWKEEVVTIDTWMQGLLKPT-ALYGQLPKFEDGDLTLYQSNAILRHLGRSLGLY-GKNQREAAQMD-MVNDGVEDLRGKYVTLIYTNYENGKNDYVKALP---GHLKPFETLLSQNQGGKAFIVGDQISFADYNLLDLL-----LIHQVLAPGCLDNFPLLSAYVARLSARPKI-KAFLSSPE-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3O76.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100282 for 1459 contacts (-68.7/contact) +
2D Compatibility (PS) -21944 + (NN) -17747 + (LL) 4116
1D Compatibility (HY) -11600 + (ID) 2600
Total energy: -150057.0 ( -102.85 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_3O76.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O76-query.scw
PDB file :
Tito_Scwrl_3O76.pdb
: