Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GHMKFTDQQIGVLAGLAISPEWLKQNIAANQLVYGIVKPSDTVPAGVDDYSYLVAADDQDGTIIFFKAEGQTVIIKYTSQRNTKLKAKALTLSQLKKEF-YQTRSQKREVDDYVAGLRTE
2DAE Chain:A ((1-75))
---------------------------------------GSSGSSGQIDFQVLHDLRQK------FPEVPEVVVSRCMLQNNNNLDACCAVLSQESTRYLYGEGDLNFSDDSGISGPSSG
General information:
TITO was launched using:
RESULT:
Template:
2DAE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 14983 for 443 contacts (33.8/contact) +
2D Compatibility (PS) -7857 + (NN) -2901 + (LL) 3244
1D Compatibility (HY) -1200 + (ID) 750
Total energy: 5519.0 ( 12.46 by residue)
QMean score : 0.153
(partial model without unconserved sides chains):
PDB file :
Tito_2DAE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DAE-query.scw
PDB file :
Tito_Scwrl_2DAE.pdb
: