Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAMHFIFSDTAVLLFDFWSVHSPAGMALSVLVLLLLAVLYEGIKVGKAKLLNQVLVNLPTSISQQTIAETDGDSAGSDSFPVGRTHHRWYLCHFGQSLIHVIQVVIGYFIMLAVMSYNTWIFLGVVLGSAVGYYLAYPLLSTA |
1TET Chain:L ((3-48)) | -------------------------------------------------LMTQTPLSLPVSLGDQ--ASISCKSSQSIVHSSGNTYFEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2786 for 157 contacts (17.7/contact) +
2D Compatibility (PS) -4630 + (NN) -8 + (LL) 5180
1D Compatibility (HY) -800 + (ID) 850
Total energy: 1678.0 ( 10.69 by residue)
QMean score : 0.172
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