Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRALRRLIQGRILLLTICAAGIGGTFQFGYNLSIINAPTLHIQEFTNETWQARTGEPLPDHLVLLMWSLIVSLYPLGGLFGALLAGPLAITLGRKKSLLVNNIF-----VVSAAILFGFSRK----------AGSFEMIMLGRLLVGVNAGVSMNIQPMYLGESAPKELRGAVAMSSAIFTALGIVMGQVV-----------GLRELLGGPQAWPLLLASCLVPGALQLASLPLLPESPRYLLIDCGDTEACLAALRRLRGSGDLAGELEELEEERAACQGCRARRPWELFQHRALRRQVTSLVVLGSAM----ELCGNDSVYAYASSVFRKAGVPEAKIQYAIIGTGSCELLTAVVSCVVIERVGRRVLLIGGYSLMTCWGSIFTVALCLQSSFPWTLYLAMACIFAFILSFGIGPAGVTGILATELFDQMARPAACMVCGALMWIMLILVGLGFPFIMEA--LSHFL----YVPFLGVCVCGAIYTGLFLPETKGKTFQEISKELHRLNFPRRAQGPTWRSLEVIQSTEL |
| 4JA4 Chain:A ((66-474)) | ---------------------------------------------------------------------------IGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVS----FNQFAIIFGQLLVYCVNYFIARSGDASWL-NTDGWRYMFASECIPALLFLMLLYTVPESPRWLM-----QEQAEGILRKIMGNTLATQAVQEIKHSLDHG------------------MFGVGVIVIGVMLSIFQQFVGINVVLYYAPEV-----------LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAI--GMFSLGTAFYTQAPGI--VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSW-----NGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -257861 for 2492 contacts (-103.5/contact) +
2D Compatibility (PS) -35437 + (NN) -11154 + (LL) 10948
1D Compatibility (HY) -30400 + (ID) 4700
Total energy: -328604.0 ( -131.86 by residue)
QMean score : 0.193
|
|
|