Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEDKVTGTLVFTVITAVLGSFQFGYDIGVINAPQQVIISHYRHVLGVPLDDRKAINNYVINSTDELPTISYSMNPKPTPWAEEETVAAAQLITMLWSLSVSSFAVGGMTASFFGGWLGDTLGRIKAMLVANIL---SLVGALL--MGFSKLGPSHIL--IIAG--------RSISGLYCGLISGLVPMYIGEIAPTALRGALGTFHQLAIVTGILISQIIGLEFILG-------NYDLWHILLGLSGVRAILQSLLLFFCPESPRYLYIKLDEEVKAKQSLKRLRGYDDVTKDINEMRKEREEASSEQKVSIIQLFTNSSYRQPILVALMLHVAQQFSGINGIFYYSTSIFQTAGISKPV-YATIGVGAVNMVFTAVSVFLVEKAGRRSLFLIGMSGMFVCAIFM-SVGLVLLNKFSWMSYVSMIAIFLFVSFFEIGPGPIPWFMVAEFFSQGPRPAALAIAAFSNWTCNFIVALCFQY------IADFCGPYVFFLFA--GVLLAFTLFTFFKVPETKGKSFEEIAAEFQKKSGSAHRPKAAVEMKFLGATETV |
| 4JA4 Chain:A ((61-479)) | ----------------------------------------------------------------------------------------------------VASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNY-FIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLM----QE-QAEGILRKIMGNTLATQAVQEIKHSLDHG----------MFGVGV----IVIGVMLSIFQQFVGINVVLYYAPEV----------LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGM---AIGMFSLGTAFYTQAP--GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSW-----NGFSYWIYGCMGVLAALFMWKF--VPETKGKTLEELEALWE------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281024 for 2711 contacts (-103.7/contact) +
2D Compatibility (PS) -36890 + (NN) -14761 + (LL) 12572
1D Compatibility (HY) -42000 + (ID) 6350
Total energy: -368453.0 ( -135.91 by residue)
QMean score : 0.289
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