Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSGFQQIGSEDGEPPQQRVTGTLVLAVFSAVLGSLQFGYNIGVINAPQKVIEQSYNETWLGRQGPEGPSSIPPGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLVNNVLAVLGG----------SLMGLANAAASY-----EMLILGRFLIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVIGILIAQVL-------GLESLLGTASLWPLLLGLTVLPALLQLVLLPFCPESPRYLYIIQNLEGPARKSLKRLTGWADVSGVLAELK---DEKRKLERERPLSLLQLLGSRTHRQPLIIAVVLQLSQQLSGINAVFYYSTSIFETAGVGQPA-YATIGAGVVNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAI-LMTVALLLLERVPAMSYVSIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTSNFIIGMGF-------QYVAEAMGPYVFLLFAVL--LLGFFIFTFLRVPETRGRTFDQISAAFHRTPSLLEQEVKPSTELEYLGPDEND |
| 4JA4 Chain:A ((17-479)) | ------------------------------ATLGGLLFGYDTAVISGTV----ESLNTVFVA------PQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDG-WRYMFASECIPALLFLMLLYTVPESPRWL-M----QEQAEGILRKIMGNTLATQAVQEIKHSLDHG-------------MFGVGV----IVIGVMLSIFQQFVGINVVLYYAPEV----------LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGM---AIGMFSLGTAFYTQAPGI--VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSW------NGFSYWIYGCMGVLAALFMWKF--VPETKGKTLEELEA-------LWE------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -317520 for 3213 contacts (-98.8/contact) +
2D Compatibility (PS) -40991 + (NN) -17610 + (LL) 6264
1D Compatibility (HY) -48000 + (ID) 6500
Total energy: -424357.0 ( -132.08 by residue)
QMean score : 0.280
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