Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENKEAGTPPPIPSREGRLQPTLLLATLSAAFGSAFQYGYNLSVVNTPHKVFKSFYNETYFERHATFMDGKLMLLLWSCTVSMFPLGGLLGSLLVGLLVDSCGRKGTLLINNIFAIIPAILMGVSKVAKAF-----------------------ELIVFSRVVLGVCAGISYSALPMYLGELAPKNLRGMVGTMTEVFVIVG---VFLAQIF---SLQAILGNPAGWPVLLALTGVPALLQLLTLPFFPESPRYSLIQKGDEATARQALRRLRGHTDMEAELEDMRAEARAERAEGHLSVLHLCALRSLRWQLLSIIVLMAGQQLSGINAINYYADTIYTSAGVEAAHSQYVTVGSGVVNIVMTITSAVLVERLGRRHLLLAGYGICGSACLVLTVVLLFQNRVPELSYLGIICVFAYIAGHSIGPSPVPSVVRTEIFLQSSRRAAFMVDGAVHWLTNFIIGFLFPSIQEAI-GAYSFIIFAGICLLTAIYIYVVIPETKGKTFVEINRIFAKRNRVKLPEEKEETIDAGPPTASPAKETSF |
| 4JA4 Chain:A ((66-479)) | -------------------------------------------------------------------------------------IGCIIGGALGGYCSNRFGRRDSLKI-------AAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIY-RIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRW-LM----QEQAEGILRKIMGNTLATQAVQEIKHSLDHG--------MFGVGVIVIG-VMLSIF-----QQFVGINVVLYYAPEV-----------LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQII--GALGMAIGMFSLGTAFYTQAPGI--VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -287420 for 2728 contacts (-105.4/contact) +
2D Compatibility (PS) -36128 + (NN) -8737 + (LL) 9136
1D Compatibility (HY) -38800 + (ID) 5300
Total energy: -367249.0 ( -134.62 by residue)
QMean score : 0.238
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