Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFSKLLEQAGGVGLFQTLQVLTFILPCLMIPSQMLLENFSAAIPGHRCWTHMLDNGSAVSTNMTPKALLTISIPPGPNQGPHQCRRFRQPQWQLLDPNATATSWSEADTEPCVDGWVYDRSVFTSTIVAKWDLVCSSQGLKPLSQSIFMSGILVGSFIWGLLSYRFGRKPMLSWCCLQLAVAG------------TSTIFAPTFVI--YCGLRFVAAFGMAGIFLSSLTLMVEWTTTSRRAV--TMTVVGCAFSAGQAALGGLAFALRD---WRTLQLAASVPFFAISLISWWLPESARWLIIKGKPDQALQELRKVARINGHKEAKNLTIEVLMSSVKEEVASAKEPR--SVLDLFCVPVLRWRSCAMLVVNFSLLISYYGLVFDLQS-LGRDIFLLQALF-----GAVDFLGRATTALLLSFLGRRTIQA---GSQAMAGLAILANMLVPQDLQTLRVVFAVLGKGCFGISLTCLTIYK-----------AELF---PTPVRMTADGILHTVGRLGAMMGPLILMSRQALPLLPPLLYGVISIASSLVVLFFLPETQGLPLPDTIQDLESQKSTAAQGNRQEAVTVESTSL |
| 5C65 Chain:A ((65-469)) | -----------------------------------------------------------------------------------------------------------------------------------------------LSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNL-LAVTGGCFMGLCKVAKSVEMLILGRLVIGLFCGL----CTGFVPMYIG------EISPTALRGAFGTLNQLGIVVGILVAQIFGLEFILGSEELWPLLLGFTILPAILQSAALPFCPESPRFLLINRKEEENAKQILQ--RLWGTQDVSQDIQE-----MKDESARMSQEKQVTVLELFRVSSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDA----PIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKD----MSFV-------CIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNF--LVGLLFPSAAHYLGAYVFIIFTGFLITFLAFTFFKVPETRGRTFEDITRAFEGQA------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C65.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221937 for 2716 contacts (-81.7/contact) +
2D Compatibility (PS) -36413 + (NN) -8254 + (LL) 13548
1D Compatibility (HY) -26400 + (ID) 4900
Total energy: -284356.0 ( -104.70 by residue)
QMean score : 0.262
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