Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILFVEPAIFLSAFAMTLTGPL-----TTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFAFQEEVQKKVSRFNLQMDISGLIPGLV-STFILLSISDHYGRKFPM-ILSSVGALATSVWLCLLCYFAFPFQLLIAS-TFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVTGLTGLSSGYF-IRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGF-KNLFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDS-PLCWNEVFIGYGSALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLFTIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGV-TAVSTFNGIYSATVAW------YPGFTFLLSAG-LLLLPAI-SLCVVKCTSWNEGSYELLIQEESSEDASDR |
| 4KQA Chain:A ((3-428)) | -----PHQPIPPSLGEKDLSDPFNFLFSSNKITLRKLYDLTKNVDFDQLRQ-NECKKNIT--LSKFWEPEDDNWERFYSNIGSCSVYSDDQMIDNLLHDLNTSPIKHVHIMDGTQVK---------FVFTFKNDKQAVFKPMRFGRDYESDPNHFYFSDF--------ERHHAEIATFHLDRVLGFRRAIPTVGRVLNMTTEL-FEKAEKKLKKTFFFSPAKNFCFVSRCDYYCDTTHA--ICGLPDMKEGSVQVFLPDESAVPRKHNRS----------PYRRTYSKKNQVAEWQSSMNYCTDKVKTKRQYAHGR--RLLDLVDIHILDYLIGNQDRHHFESFNVFNDLP-----SYAIHLDHGRA--------FGRSDFDDDDIILPLRQC----CILRPSTFQTLMNFYSTPKSLTKALHESLSKDPAHPILAYKHYPAMERRLAKIMS-HILECFE-SRGVAEVLVAEYNNPD---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -314732 for 3176 contacts (-99.1/contact) +
2D Compatibility (PS) -40254 + (NN) 5785 + (LL) 6460
1D Compatibility (HY) -800 + (ID) 3300
Total energy: -346841.0 ( -109.21 by residue)
QMean score : 0.164
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