Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPAPRAPRALAAAAPASGKAKLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDERSHPPRYRGIGDCVRQTVRSHGVLGLYRGLSSLLYGSIPKAAVRFGMFEFLSNHMRDAQGRLDSTRGLLCGLGAGVAEAVVVVCPMETIKVKFIHDQTSPNPKYRGFFHGVREIVREQGL-KGTYQGLTATVLKQGSNQAIRFFVMTSLRNWYRGDNPNKPMNPLITGVFGAIAGAASVFGNTPLDVIKTRMQGLEAHKYRNTWDCGLQILKKEGLKAFYKGTVPRLGRVCLDVAIVFVIYDEVVKLLNKVWKTD |
4FSV Chain:A ((313-386)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------FRGTLEPVEKALRDAKLDKGQIQEI---VLVGGSTRIPK--IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDK------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10249 for 387 contacts (-26.5/contact) +
2D Compatibility (PS) -7781 + (NN) -4711 + (LL) 15712
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: -11779.0 ( -30.44 by residue)
QMean score : 0.213
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