Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEVKSLLMVMATLTIAGCSQNEMTEMNPDTNRTIGLDVYTEVQTRGTETTTSTLKANAGFGIF-AYQTSSAGWNSEKGNTTPNFMYNEHATWTSDSWGYTNLRFWPIDDKKITFFAYAPYESKPEVGTDQKITLSGQNAKGAPTI-TFEVKTSNNWKDMIDLVTDCHTAIQDQTNESNKGTVQFKFSHVLTQIANIKVKPDVNLGTDTKIFVTGLKLDPGSTTLYNKAVYKFDNDTWEAISPDASYFSTEQDLSDFLNKTTTDQWGYNKSSINVSDDQNATALFSDTEALYFIPVNNKNGTTNAG-DLKLKINYDIVTKVTDTSNLTSTITNKEVSLPKNTFKKGTKHTYVLTIKMNAIKITVEDNMEGWTDDSDSDINVEK |
| 4K4K Chain:A ((7-270)) | --------------------------QPTDGRV----------ALEATSGDKTWEAGDAIGIYMLNGDATDGNGNRKYTTAQT---AENGSFTAAE---GQTIYFPVDASQRDFVAYYPYRETLADGNVYTVDVSVQTPQKDIDLMGAAKVEGKD---------------------KTDPKVAFVFTHKLVKL-DITIKADGTSLTDADLAGTTVSISN----QQTAATYNVVTG--------------------------------GDATVTTGTTKEIVLHTDGLKAEGIVL----PAASTAGMALTFTV------PGLEGQAFHWDVNSAA---QSKAFVAGSKYLYTITISKA--GVEVSSKVEDWT----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K4K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7562 for 1884 contacts (4.0/contact) +
2D Compatibility (PS) -27526 + (NN) -10325 + (LL) 8708
1D Compatibility (HY) -8000 + (ID) 2400
Total energy: -31981.0 ( -16.98 by residue)
QMean score : 0.192
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