Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GRIPSPPSKTSLD--IAEELQNDKGVSFAFQAREEELGAFTKRTLFAYSGDGLTGPFKAPASAELSSFLTAHPKGRWLIAFPLGTGIVSVDEGILTLEISRSLPEVGSGSSFYLTEK
1XOU Chain:B ((2-85))
GIVSQTRNKELLDKKIRSEIEAIKKIIAEFDVVKESVNELSEKAKT-----------DPQAAEKLNKLIEGYTYGEERKLYD--SALSKIEKLIETL--------------------
General information:
TITO was launched using:
RESULT:
Template:
1XOU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -357 for 379 contacts (-0.9/contact) +
2D Compatibility (PS) -8419 + (NN) 3191 + (LL) 716
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -8819.0 ( -23.27 by residue)
QMean score : 0.134
(partial model without unconserved sides chains):
PDB file :
Tito_1XOU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XOU-query.scw
PDB file :
Tito_Scwrl_1XOU.pdb
: