Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTQQLYFLNDIGKQKPESIRNRSAACPFCDRENLTDILATEGSIIWL-KNKFPTLKDTFQTVLIETDNCEDHIATYTEEHMRSLIRFSIKHWLNL-----QKNEEFTSVILYKN-HG-PFSGGSLHHAHMQIIGMKYVNYLDNVEQDNFQGVIVQKNEHIELNISDR-PIIGFTE--------FNIIIEDIGCIDELANYIQQTVRYILT-DFHKGCSSYNLFFYYLNEKIICKVVPRFVVSP-LYV-GYKIPQVSTKIE-------DVKIQLAAYFTKQ---------NDAIIHKKIE-- |
| 3DUP Chain:A ((2-285)) | ----------------SLSFLKHVQDCNTHDLSNFVRFVIEGRRVGWVRKALAQRLKAHGRVFDVTRDAVLLSASLRTPQSRTRAVADVVDRLADEGVVPAPRGELYRVNQSWGEPTLMLLDRAVVPTFGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQAIPVGAITYCMESPAGIKPDTLFLYDLA--LPEDFRPHNTDGEMADFMLWPAAKVVEAVRTTEAFKFNVNLTVIDFAIRHGLIDPDNEPDYQEILAGLRGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DUP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99783 for 1805 contacts (-55.3/contact) +
2D Compatibility (PS) -26381 + (NN) -5973 + (LL) 1292
1D Compatibility (HY) -800 + (ID) 1350
Total energy: -132995.0 ( -73.68 by residue)
QMean score : 0.237
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