Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSLVKIMGSFLALSLIMIFSSCIVNEHVDEGNIKENAVRMMECIVNKDSEKLFDFY-NKDMK--DN-YKDSSLDEIRQLFEYI-D-GAITSYNYEGKGGGQEAKNDGIICYYSCHPEFDFTTETGQEYTISFSYHYIWNEHPEYEGINMIQICKDGNWGEKLIIGRNYYKE
3HX8 Chain:A ((1-128))
--------------------------GQSAKEAIEAANADFVKAYNSKDAAGVASKYMDDAAAFPPDMARVDGRQNIQKLWQGAMDMGIS-----ELKLTTLDVQESGDFAFESGSFSLKAPGKDSKLVDAAGKYVVVWRKGQ------------DGGWKLYRDIWNSDPA-
General information:
TITO was launched using:
RESULT:
Template:
3HX8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13881 for 831 contacts (-16.7/contact) +
2D Compatibility (PS) -13060 + (NN) -4738 + (LL) 3928
1D Compatibility (HY) 1600 + (ID) 900
Total energy: -27051.0 ( -32.55 by residue)
QMean score : 0.218
(partial model without unconserved sides chains):
PDB file :
Tito_3HX8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HX8-query.scw
PDB file :
Tito_Scwrl_3HX8.pdb
: