Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------SSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGH---------------------------------------------------------------------------------- |
| 1R5M Chain:A ((34-425)) | GFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETYWKLTIIAELRHPFALSTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKGSLGVDVEWVDDDKFVIPGPK-GAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIPG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R5M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45049 for 1584 contacts (-28.4/contact) +
2D Compatibility (PS) -22873 + (NN) -22781 + (LL) 44
1D Compatibility (HY) -14000 + (ID) 2650
Total energy: -107309.0 ( -67.75 by residue)
QMean score : 0.493
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