Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------MSEAALT-PAFEEPE--------APRASPRSRSTLLKRLADVVCLPSSRINAFERSMT------------------ADLLVEMLRD-ANVGEREKVAR-----------------RLAMLNEMPGVLVRLLLRDELP------------VARALLVDSEK-LSDADLISCLYQATTEHRRLIAQRRGVSEV-------VADALIEVGEPAVIETLLR-----NELVKLSHQGVEN------------IVAATRDAQHLIPLLLRR----------AELRPSHAYVMFWWADSEARRVILQRFAVSREILQDAVGDVFALASAEGWQDPLSRKALQFIERRQRNRAAIAKSPFNSLDEAVAAGEGGFNREIAEEISYLSGLKPMTGAKIFTDPGGEPLAILCKATGLPRGCVRQLWRG---LRRQEVDRTGATDPNLERVLTVYDAIAVDRAQTVLRYW-----------------------------NWSLTSALTPALLKAIRDGDEAAVDEYSAPQRAAMLALSRDFGR------------------------ |
| 3J5P Chain:A ((1-564)) | LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPLNRLLQDKWDRF-VKRIFYFNFFVYCLYMIIFTAAAYYRPVEGLPPYKLKNTVGDYFRVTGEILSVSGGVYFFFRGIQYFLQRRPSVDSYSEILFFVQSLFMLVSVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLIEDGKYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVFIILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73044 for 2556 contacts (-28.6/contact) +
2D Compatibility (PS) -43653 + (NN) -19942 + (LL) 104
1D Compatibility (HY) -21600 + (ID) 2800
Total energy: -160935.0 ( -62.96 by residue)
QMean score : 0.264
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