Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASWSHPQFEKGADDDDKSEPPVSMLMQVAGAVETSKGGEKWAPVTRNKFLFVGTQVRTGADGGGKLIDQNSGMAQTIGANSVVEITAAGPKAVSGSLSAPEAASGDLVAGLSNRFAEAQRYTTVRRSVKKEAADLKLRVASDITLSPTYPDLVWENMGAQYGYTLVIDGTSHAVPATSGEMVRFRVPSLTPGAHSFGVTVTEGGQAVGQTEK--GGTIVWLSATEDKALVDGVARVKAASTGDEFALGNYLDSKGVTVAAMDAYRKHFASHKDDNDMRPLLIKTYNDLKLRDLRQKEALVYNEQLEGNPGFSSISAHHHHHHHHHH |
3M1L Chain:A ((197-262)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------GKVAIVTGAARGIGATIAEVFA------RDGAHVVAIDVESAAENLAETASKVGGTALWLDVTADDA-VDKIS-------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3M1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -11644 for 446 contacts (-26.1/contact) +
2D Compatibility (PS) -7259 + (NN) -4340 + (LL) 14644
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -13999.0 ( -31.39 by residue)
QMean score : 0.051
|
|
|