Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MFFSKDEKNPIKRALQGELLQNEPFIQLCTKIENYLMDTEAVNEQLIELNEQ-LTMRLKEKGLKPGEKGATKQLRTLIQEILTEAGFREGMLQTIGNKPLKKEDFMFLVSSGFMLKDSSLRASSHGELTHAIQWCLIILKQKKDSSFLENIPTSEICDRIYKKLGHQDSSNPNYPFTCWDVLIDKLGEIDSRSPEWLSDHIQNDEDQIFPVLREVIKNRTEKGKTEENKGKLQKKLE--NPPEHYEKHEEIENILMPKPK |
| 3V85 Chain:A ((1-210)) | MEVEVKLRLLTAAAHLRLTTLLTPY-------HLKTLHQRNTFFDTPK-----NDLSLRRAVLRLRFLQNSPSPPRCIVSLKA---------KPTLANGISRVEEDEEEIE-------------------------------YWIGKECVESPAKLSDIGSRVLKRVKEEYGFNDFL----GFVCLGGFENVRNVYEWRGVKLEVDETKYDFGNCYEIECET-------EEPERVKTMIEEFLTEEKIEFSNSDMTKFAVFRSGKLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V85.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 67696 for 1439 contacts (47.0/contact) +
2D Compatibility (PS) -19985 + (NN) 2553 + (LL) 4936
1D Compatibility (HY) -400 + (ID) 1300
Total energy: 53500.0 ( 37.18 by residue)
QMean score : 0.074
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