Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTSVWGKSILALVFTFMCSLAISAASPKDYLYDTKEENGKIISKVVFLQENGLLNKQVRYEFQYNENGKVSEKKAFRWDRTNDEWVPFYQITYQYDDQSGEIKTNYGMWDKKKKNFSLNVQNMIIPSTNYEEIFS
3WNX Chain:A ((127-220))
-------------------------------FFDSFDNDGKKNNPAIVIIGN---NGQIHYDHQ--NDGASQALASCQRDFRNKPYPVRAKITYYQNTLTVMINNGF-TPDKNDYEFCAKVENMIIPAQGH-----
General information:
TITO was launched using:
RESULT:
Template:
3WNX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 37821 for 579 contacts (65.3/contact) +
2D Compatibility (PS) -9814 + (NN) -2216 + (LL) 3184
1D Compatibility (HY) -1600 + (ID) 1200
Total energy: 26175.0 ( 45.21 by residue)
QMean score : 0.115
(partial model without unconserved sides chains):
PDB file :
Tito_3WNX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WNX-query.scw
PDB file :
Tito_Scwrl_3WNX.pdb
: