Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEPIILRYFPVLGRAQALRHALADAELAFRDLRIPLEQWSQHKDSDAGGPYGSLPTLRWHGVEVAETIAIASFLARSLGHYEGRDNGEIARLEAVVSLCYTEVSLQIAQLLWLDLFNPGVDLAAAVPLQFGRLVARLTRLEAHTPEAGWFGGERPVMADYFAAEAIEALRYLLGREHDDALRTRLPHLCALARRMAQRPALAQAWSTRPQTFTAHPDEAAMLERLRALPLAATIGASME
2OAD Chain:A ((2-197))
---PYTIVYFPVRGRCEAMRMLLADQGQSWKEEVVTIDTWMQGLLKPT-CLYGQLPKFEDGDLTLYQSNAILRHLGRSLGLY-GKNQREAAQMD-MVNDGVEDLRGKYVTLIYTNYENGKNDYVKALP---GHLKPFETLLSQNQGGKAFIVGDQISFADYNLLDLLLIHQVLAPGALDN-----FPLLSAYVARLSARPKI-KAFLSSPE-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OAD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103943 for 1462 contacts (-71.1/contact) +
2D Compatibility (PS) -22048 + (NN) -18401 + (LL) 4072
1D Compatibility (HY) -10400 + (ID) 2650
Total energy: -153370.0 ( -104.90 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_2OAD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OAD-query.scw
PDB file :
Tito_Scwrl_2OAD.pdb
: