Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ATMAFHPMLCRLELSVSAAPPASPIDATLLRSLITSVLNSSWVDLGGNTANEKVLCAIGLIEAFCRERVIPPTSNSFNTSVTYHIMVEDLDPDDLGNIQLINKPLLSLEGDLKVLGSYQLTFQTIPGHSEPRSMTDNGIYHSDSPFFQIALGHALLGTGKIYDHITRALRVAPITIAPEKRKEPLSSYMV |
3R4Z Chain:A ((131-165)) | ---------------------------------------------------------------------------------------------------------------LRHNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPF-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1410 for 135 contacts (-10.4/contact) +
2D Compatibility (PS) -3801 + (NN) -3693 + (LL) 10392
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -1212.0 ( -8.98 by residue)
QMean score : 0.057
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