Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------GHMGSPVS-YYFSYADGG--TSHTEYPDDSSAGSFILDIT---SYKKTGNSTKALSWNASGDSWIHVNGSSVSYDENPAKERRTGLVTLK-QDESGKTLSLKIVQPGKTSID |
| 3MSW Chain:A ((1-139)) | GTNNGKQFIHNDTMEGGKLVCREIYAMNDAASGILNPVKMYKYSYDTDQQKTVKSTYAWNIFKNTWETESRTVISRYETETSVEYSVWNKEKGSFDLSKKYIYITDNNN---QLIAQYAYKMNSRTNQWILEKDALTPIYEN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12287 for 513 contacts (24.0/contact) +
2D Compatibility (PS) -11164 + (NN) -7461 + (LL) 236
1D Compatibility (HY) 400 + (ID) 850
Total energy: -6552.0 ( -12.77 by residue)
QMean score : 0.266
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