Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELQPPEASIAVVSIPRQLPGSHSEAGVQGLSAGDDSELGSHCVAQTGLELLASGDPLPSASQNAEMIETGSDCVTQAGLQLLASSDPPALASKNAEVTGTMSQDTEVDMKEVELNELEPEKQPMNAASGAAMSLAGAEKNGLVKIKVAEDEAEAAAAAKFTGLSKEELLKVAGSPGWVRTRWALLLLFWLGWLGMLAGAVVIIVRAPRCRELPAQKWWHTGALYRIGDLQAFQGHGAGNLAGLKGRLDYLSSLKVKGLVLGPIH---KNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPNY-------------RGENS----WF-----------STQVDTVATKVK-----------------DALEFWLQAGVDGFQVRDIENLKDASSFLAEWQNITKGFSEDRLLIAGTNSSDLQQIL--SLLESNKDLLLTSSYLSDSGSTGEHTKSLVTQYLNAT-----GNRWCSWSLSQARLLTSFLPA-----QLLRLYQLMLFTLPGTPVFSYGDEIGLDAAALPGQPMEAPVMLWDESSFPDIPGAVSANMTVKGQSEDPGSLLSLFRRLSDQRSKERSLLHGDFHAFSAGP--GLFSYIRHWDQNERFLVVLNFGDVGLSAGLQASDLPASASLPAKADLLLSTQPGREEGSPLELERLKLEPHEGLLLRFPYAA |
| 1JF6 Chain:A ((170-581)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDLKGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTA--DYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSRTNYETYAVQVPAMPKLRTENPEVKEYLFDVARFWMEQGIDGWRL-DVANEVD-HAFWREFRRLVKSLNPD-ALIVGEIWHDASGWLMGDQFDSVMNYLFRESVIRFFATGEIHAERFDAELTRARMLYPEQAAQGLWNLLDSHDTERFLTSCGGNEAKFRLAVLFQMTYLGTPLIYYGDEIGMAGATDPD--CRRP-MIWEE-------------------KEQNRGLFEFYKELIRLRHRLASLTRGNVRSWHADKQANLYAFVRT-VQDQHVGVVLNNRGEKQTVLLQVPESGGKTWL----DCLTGEEVHGKQGQL----KLTLRPYQGMILWNGR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105028 for 2656 contacts (-39.5/contact) +
2D Compatibility (PS) -36814 + (NN) -16665 + (LL) 18152
1D Compatibility (HY) -28000 + (ID) 5550
Total energy: -173905.0 ( -65.48 by residue)
QMean score : 0.414
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