Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDHSHHMGMSYMDSNSTMQPSHHHPTTSASHSHGGGDSSMMMMPMTFYFGFKNVELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLFSWKKAVVVDITEHCH |
1Q90 Chain:M ((15-33)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------GMTLVGLAIGFVLLRVESLVE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1037 for 68 contacts (-15.2/contact) +
2D Compatibility (PS) -1827 + (NN) 303 + (LL) 12236
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 8325.0 ( 122.43 by residue)
QMean score : -0.369
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