Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENKEAGTPPPIPSREGRLQPTLLLATLSAAFGSAFQYGYNLSVVNTPHKVFKSFYNETYFERHATFMDGKLMLLLWSCTVSMFPLGGLLGSLLVGLLVDSCGRK---GTLLINNIFAII-----PAILMGVSKVAKAFELIVFSRVVLGVCAGISYSALPMYLGELAPKNLRG--------------MVGTMTEVFVIVGVFLAQIFSLQAILGNPAGWPVLLALTGVPA---LLQLLTLPFFPESPRYSLIQKGDEATARQALRRLRGHTDMEAELEDMRAEARAERAEGHLSVLHLCALRSLRWQ-----------LLSIIVLMAGQQLSGIN--AINYYADTIYTSAGVEAA----HSQYVTVGSGVVNIVMTIT--------SAVLVERLGRRHLLLAGYGICGSACLVLTVVLLFQNRVPELSYLGIICVFAYIAGHSIGPSPVPSVVRTEIFLQSSRRAAFMVDGAVHWLTNFIIGFLFPSIQEAIGAYSFI-IFAGICLLTAIYIYVVIPETKGKTFVEINRIFAKRNRVKLPEEKEETIDAGPPTASPAKETSF |
| 4J05 Chain:A ((85-520)) | -------------------------------------------------------------------------------------IGCVVGQVMFGVLGDSFGRKFVYGKELILIIVATIFQMSAPSHWDG----NRVLTWITICRVFLGIGIGGDYPMSATVVSDRANIHRRGTLLCFIFANQGWGSFVGSLVTIVTISG-FKHRLKSGHTHDVDKA-WRILIGLSLIPAFGTLYQR--------------------------------------------------------------------WQEFVAYFSTWNHFRNLLGSMLGWFLVDIAFYGINLNQSVVLAQIGFAGKTGDVYDKLFQLATG--NIIVTALGFLPGYYFTLFLIDIVGRKKLQFMGFIMSGLFLAILAGEIDHIGKGPLLA-----CFTFMQFFFNFGANTTTFIVAAELFPTRIRASAHGISAAAGKCGAILSSLVFNQLKAKIGTSAVLWIFFSTCILGFISTF-LIDETMGVDPDEKD-LEERRAR-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252165 for 2430 contacts (-103.8/contact) +
2D Compatibility (PS) -30876 + (NN) 4232 + (LL) 13632
1D Compatibility (HY) -20800 + (ID) 4300
Total energy: -290277.0 ( -119.46 by residue)
QMean score : 0.100
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