Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------MLVTAYLAFVGLL---ASCLGLELS-----RCRAKPPGRACSNPSFLRFQLDFYQVYFL-----------ALAADWLQAPYLYKLYQHYYFLEGQIAIL---------YVCGLASTVLFGLVASSLV-----DWL--------------------------GRKNSCVLFSLTY-------SLCCLTKLSQDYF-----------------------------VLLVGRALGGLST-------------ALLFSAFEAWYIHEHVERHDF-PAEWIPATFARAAFWNH--------------VLAVVAGVAAEAVASWIGLGPVAPF-----VAAIPLLALAGALALRNWGENYDRQRAFSRTCAG--GLRCLL-----SDRRVLLLGTIQALFESVIFIFVFLWTPVLDPHGAPLGIIFSSFMAASLLGSSLYRIATSKRYHLQPMHLLSLAVLIVVFSLF-MLTFSTSPGQESPVESF--IAFLLIELACGLYFPSMSFLRRKVIPET--------EQAGVLNWF----RVPLHSLACLGLLVLH----DSDRK-TGTRNMF--SICSA-------VMVMALLAVVGLFTVVRHDAELRVPSPTEEPYAPEL |
| 4Z24 Chain:A ((4-652)) | NLTGDIVIIGAGAAGSLLAHYLARFSNMKIILLEAGHSHFNDPVVTDPMGFFGKYNPPNENISMSQNPSYSWQGAQEPNTGAYGNRPIIAHGMGFGGSTMINRLNLVVGGRTVFDNDW---PVGWKYDDVKNYFRRVLVDINPVRDNTKASITSVALDALRIIAEQQIASGEPVDFLLNKATGNVPNVEKTTPDAVPLNLNDYEGVNSVVAFSSFYMGVNQLSDGNYIRKYAGNTYLNRNYVDENGRGIGKFSGLRVVSDAVVDRIIFKGNRAVGVNYIDREGIMHYVKVNKEVVVTSGAFYTPTILQRSGIGDFTYLSSIGVKNLVYNNPLVGTGLKNHYSPVTITRVHGEPSEVSRFLSNMAANPTNMGFKGLAELGFHRLDPNKPANANTVTYRKYQLMMTAGVGIPAEQQYLSGLSPSSNNLFTLIADDIRFAPEGYIKI--GTPNI-PRDVP-KIFFNTFVTYTPTSAPADQQWPIAQKTLAPLISALLGYDIIYQTLMSMNQTARDSGFQVSLEMVYPLNDLIYKLHNGLATYGANWWHYFVPTLVGDDTPAGREFADTLSKLSYYPRVGAHLDSHQGCSCSIGRTVDSNLKVIGTQNVRVADLSAAAFPPGGNTWATASMIGARAVDLILGFPYLRDLPVNDVPILNVN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z24.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -341690 for 3216 contacts (-106.2/contact) +
2D Compatibility (PS) -45688 + (NN) -9285 + (LL) 848
1D Compatibility (HY) -8800 + (ID) 3950
Total energy: -408565.0 ( -127.04 by residue)
QMean score : 0.147
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