Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MPAPQRKHRRGGFSHRCFPTPQTAMTPQPAGPPDGGWGWVVAAAAFAINGLSYG--------------LLRSLGLAFPDLAEHFDRSAQDTAWISALALAVQQAASPV---------------GSALSTRWGARPVVMVGGVLASLGFVFSAFASDLLHLYLGLGLLAGFGWALVFAPALGTLSRY----FSRRRVLAVGLALTGNGASSLLLAPALQLLL-----------DTFGWRGALL------LLGAITLHLTPCGALLLP----LVLPGDPPAPPRSPLAALGLSLFTRRAFSIFALGTALV----------GGGYFVPYVHLAPHALDRGLGGYG--------AALVVAVAA-----MGDAGARLVCGWLADQGWVPLPRLLAVFGALTGLGLWVVGLVPVVGGEESWGGPLLAA------AVAYGLSAGSYAPLVFGV---LPGLVGVGGVVQATGLVMMLMSLGGLLGPPLSGFLRDETGDFTASFLLSGSLILSGSFIYIGLPRALPSCGPASPPATPPPETGELLPAPQAVLLSPGGPGSTLDTTC |
| 1GNL Chain:A ((1-543)) | SNAMFCYQCQETVGNKG--CTQVGVCGKKPETAALQDALIYVTKGLGQIATRLRAEGKAVDHRIDRLVTGNLFATITNANFDDDILAERVRMTCAAKKELAASLT------DKSGLSDAALWEASEKSAMLAKAGTVGVMATTDDDVRSLRWLITFGLKGMAAYAKHADVLGKHENSLDAFMQEALAKTLDDSLSVADLVALTLETGKFGVSAMALLDAANTGTYGHPEITKVNIGVGSNPGILISGHDLRDLEMLLKQTEGTGVDVYTHSEMLPAHYYPAFKKYAHFKGNYGNAWWKQKEEFESFNGPVLLTTNCLVPPKDS--YKDRVYTTGIVGFTGCKHIPGEIGEHKDFSAIIAHAKTCPAPTEIESGEIIGGFAHNQVLALADKVIDAVKSGAIKKFVVMAGCDGRAKSRSYYTDFAEGLPKDTVILTAGCAKYRYNKLNLGDIGGIPRVLDAGQCNDSYSLAVIALKLKEVFGLEDVNDLP-----IVYNIAWYEQKAVIVLLALLSLGVKNIHLGPT-LPAFLSPNVAKVLVEQFNIGGITSPQDDLKAFF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -330290 for 3824 contacts (-86.4/contact) +
2D Compatibility (PS) -47904 + (NN) -20979 + (LL) 356
1D Compatibility (HY) -800 + (ID) 3150
Total energy: -402767.0 ( -105.33 by residue)
QMean score : 0.182
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