Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MLSYGERLGSPAVSPLPVRGGHVMRGTAFAYVPSPQVLHRIPGTSAYAFPSLGPVALAEHTCPCGEVLERHEP---LPAKLALEEEQKPESRLVPKLRQAGAMLLKVPLMLTFLY------------------------LFVCSLDMLSSAFQLAGGKVAGDIFKDNAILSNPV--AGLVVGILVTVLVQSSSTSTSIIVSMVSSG----LLEVSSAIPIIMGSNIGTSVTNTIVALMQAGDRTDFRRAFAGATVHDCFNWLSVLVLLPLEAATGYLHHITRLVVA-SFNIHGGRDAPDLLKIITEPFTK---------------LIIQLDESVITSIATGDESLRNHSLIQIWCH----------PDSLQAPTSMSRAEANSSQTLGNATMEKCNHIFVDTGLPDLAVGLILLAGSLVLLCTCLILLVKMLNSLLKGQVAKVI-QKVINTDFPAPFTWVTGYFAMVVGASMTFVVQSSSVFTSAITPLIGLGVI--SIERAYPLTLGSNIGTTTTAILAALASPREKLSSAFQIALCHFFFNISGILLWYPVPCTRLPIRMAKALGKRTAKYRW-------------FAVLYLLVCFLLLPSLVFGISMAGWQVMVGVGTPFGALLAFVVLINVLQSRSPGHLPKWLQTWDFLPRWMHS--------------------LKPLDHLITRATLCCARPEPRSPPLPPRVFLEELPPATPSPRLALPAHHNATRL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4XMM Chain:E ((10-1044)) | ACLSRIDANLLQYYEKPEPNNTVDLYVSGSEYSNCLLLS--NSEYICYHFSSRST--LLTFYPLSDAYH----GKTINIHLPNASMNQRYTLTIQEVEQQLLVNVILKDGS-FLTLQLPLSFLFSSANTLNGEWFHLQNPYDFTVRVPHFLFYVSPQFSVVFLEDGGLLGLKKVDGVHYEPLLFNDNSYLKSLTRFFSRSSKSDYDSVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYN-NTLVTLLPLENGLFQMGTLLVLTYTFQNNIPTNLSASAIWSIVDLVLTRPLELNVEASYLNLIVLWKSGTASKLQILNVNDESFKNYEWIESVNKSLVDLQSEHDLDIVTKTGDVERGFCNLKSRYGTQIFERAQQILSENKIIMAH------NEDEEYLANLETILRDVKTAFNEASSITLYGDEIILVNCFQPYN-HSLYKLNTTVENWFYNMHSETDGSELFKYLRTLNGFASTLSNDVLRSISKKFLDIITGELPDSMTTVEKFTDIFKNCLENQFEITNLKILFDELNSFDIPVVLNDLINNQMKPGIFWKKDFISAIKFDGFTSIISLESLHQLLSIHYRITLQVLLTFVLFDLDTEIFGQHISTLLDLHYKQFLLLNLYRQDKCLLAEVLLKDSSEFSFGVKFFNYGQLIAYIDSLNSNVYNTENSFFMTFFRSSHKNIRFFLENVECEVQEFMFAMTLFSFDQSYEIFQLHDIWKDLLCTFTVPHSAFYYQLSLLFDQEFALKCISKSAEYSLQDFKEKQHIHYLNLLIHFEVLDVLRLGHECRTNFLQLLLQEDIDFFSTLLRLCNAHSDKIVDSILSQNLRSCFKKLYCFRMLNAAAEVLYQYILMIRKRKCYLMVINVLSVTLTDLRDELRG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -314758 for 4603 contacts (-68.4/contact) +
2D Compatibility (PS) -64193 + (NN) 4610 + (LL) 1816
1D Compatibility (HY) -27600 + (ID) 4950
Total energy: -405075.0 ( -88.00 by residue)
QMean score : 0.139
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