Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSGPGIQAAIDLTAGAAGGTACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGLRGFY-KGTGP-ALMAYVAENSVLFM---CYGFCQQFVRKVAGMDKQAKLSDLQTAAAGSFASAFAALALCPTELVKCRLQTMYEMEMSGKIAK--SHNTIWSVVKGILKKDGPLGFYHGLSSTLLQEVPGYFFFFGGYELSRSFFASGRSKDELGPVHLMLSGGVAGICLWLVVFPVDCIKSRIQVLSMYGKQAGFIGTLLSVVRNEGIVALYSGLKATMIRAIPANGALFVAYEYSRKMMMKQLEAY |
| 1IWP Chain:A ((250-365)) | ------------------------------------------------------YASRGLKMRYTSGTGSEALMGYSESKSMLYLESRCI-----FITKGAG------VQGLQNGAVSCIGMTGAVPSGIRAVLAENLIASMLDLEVASANDQTFSHSDIRRTAR-----------------TLMQMLPGTDFIFSGYSAVPNYDNMFAGSNFDAEDFDDYNILQRDLMVDGGLRPVTEAETIAIRQKAARAIQAVFRELGLPPIADEEVEAATYAHGSNEMPPRNVVEDLSAVEEMMKRNITGLDIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IWP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31589 for 827 contacts (-38.2/contact) +
2D Compatibility (PS) -11057 + (NN) -1120 + (LL) 3792
1D Compatibility (HY) -6800 + (ID) 1900
Total energy: -48674.0 ( -58.86 by residue)
QMean score : 0.056
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