Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPAPRAREQPRVPGERQPLLPRGARGPRRWRRAAGAAVLLVEMLERAAFFGVTANLVLYL----NSTNFNWTGEQATRAALVFLGASYLLAPVGGWLADVYLGRYRAVALSLLLYLAASGLLPATAFPDGRSSFCGEMPASPLGPACPSAGCPRSSPSPYCAPVLYAGLLLLGLAASSVRSNLTSFGAD--QVMDLGRDATRRFFNWFYWSINLGAVLSLLVVAFIQQNISFLLGYSIPVGCVGLAFFIFLFATPVFITKPPMGSQVSSMLKLALQNCCPQLWQRHSARDRQCARVLADERSPQPGASPQEDIANFQVL---VKILPVMVTLVPYWMVYFQMQSTYVLQGLHLHIPNIFPANPANISV-ALRAQGS------------SYTIPEAWLLLANVVVVLILVPLKDRLIDPLLLRCKLLPSALQKMALGMFFGFTSVIVAGVLEMERLHYIHHNETVSQQIGEVLYNAAPLSIWWQIPQYLLIGISEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSSLVALLSLPGGWLHCPKDFGNINNCRMDLYFFLLAGIQAVTALLFVWIAGRYERASQGPASHSRFSRDRG |
| 4D2B Chain:A ((16-444)) | -----------------------------------STLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAV------------------FWGGVLIMLGHIVLAL----------------PFGASALFGSIILIIIGTGFLKPNVSTLVGTLYDEHDRRRDAG---FSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKK--TLDPHYLRPTD--PLAPEEVKPLLVKVSLAVAGFIAIIVV------------MNLVGWNSLPAYINLLTIVAIAIPVFYFAWMIS---------LRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTA------NQPSSPTKFAVGLMFAGLSFLLMAI------------------PGALYGTSGKVSPLWLVGSWALVILGEMLISPVGLSVTT----------MMSMWFLSSSVGSALNAQLVTLYNAKSEVAYFSYFGLGSVVLGIVLVFLS------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281551 for 3055 contacts (-92.2/contact) +
2D Compatibility (PS) -39285 + (NN) -3709 + (LL) 9384
1D Compatibility (HY) -38000 + (ID) 4600
Total energy: -357761.0 ( -117.11 by residue)
QMean score : 0.257
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