Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQGARAPRDQGRSPGRMSALGRSSVILLTYVLAATELTCLFMQFSIVPYLSRK-LGLDSIAFGYLQTTFGVLQLLGGPVFGRFADQRGARAALTLSFLA---ALALYLLLAAASSPALPGVYLLFASRLPGA------LMHTLPAAQMVITDLSAPEERPAALGRLGLCFGVGVILGSLLGGTLVSAYGIQCPAILAALATLLGAVLSFTCIPASTKGAKTDAQAPLPGGPRASVFDLKAIASLLRLPDVPRIFLVKVASNCPTGLFMVMFSIISMDF---FQLEAAQAGYLMSFFGLLQMVTQGLVIGQLSSHFSEEVLLRASVLVFIVVGLAMAWMSSVFHFCLLVPGLV--FSLCTLNVVTDSMLIKAVSTSDTGTMLGLC-ASVQPLLRTLGPTVGGLLYRSFGVPVFGHVQVAINTLVLLVLWRKPMPQRKDKVR |
| 2CFQ Chain:A ((9-391)) | -------------------------FWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQY----NILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSR--RSNFEFGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLL-FFAKTDAPSSATVANAVG---ANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASI-MFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEV--VILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -305951 for 3015 contacts (-101.5/contact) +
2D Compatibility (PS) -36272 + (NN) 1440 + (LL) 880
1D Compatibility (HY) -23600 + (ID) 3200
Total energy: -366703.0 ( -121.63 by residue)
QMean score : 0.214
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