Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPVEEFVAGWISGALGLVLGHPFDTVKVRLQTQTTYRGIVDCMVKIYRHESLLGFFKGMSFPIASIAVVNSVLFGVYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYTPEGQNPSSATVLVAGGFAGIAS----WVAATPLDMIKSRMQMDGLRRRVYQGMLDCMVSSIRQEGLGVF-FRGVTINSARAFPVNAVTFLSYEYLLRWWG |
3HV8 Chain:A ((50-140)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NYEVLLRLLNPQGQEVPPAEFLHAAKEAGLAEKIDRWVILNSIKLLAEH-----------QTKLFVHLSSASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15131 for 459 contacts (-33.0/contact) +
2D Compatibility (PS) -8106 + (NN) -1510 + (LL) 13148
1D Compatibility (HY) -5200 + (ID) 1300
Total energy: -18099.0 ( -39.43 by residue)
QMean score : 0.038
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