Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFAFQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCLLCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVTGLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKNLFYRTYM-LFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIG---YGSALGSASFL-TSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTA-FASTTLMMFLA-RVPFLFTIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFLLSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDASDR |
| 3WDO Chain:A ((13-381)) | ---WGLGTVFSLRMLGMFMVLPVLTTYGMALQ-----GA-----------------------------SEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALS----DSIWGIILGRALQGSGAI----AAAVMALLSDLT-REQNRTKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRES---------GMVKGSFSKVLAEP------RLLKLNFGIMCLHMLLMSTFVALPGQLAD--AGFPAAEHWKVYLATMLIAFGSVVPFIIYAEV-KRKMKQ--VFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFD---GQGVFLAGAMLAAVWLAVASTMKEPPYVSSLRIEIPADIAANEALKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -414842 for 3127 contacts (-132.7/contact) +
2D Compatibility (PS) -36737 + (NN) -3225 + (LL) 4340
1D Compatibility (HY) -9200 + (ID) 2450
Total energy: -462114.0 ( -147.78 by residue)
QMean score : 0.154
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