Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEAKEKQHLLDARPAIRSYTGSLWQEGAGWIPLPRPGLDLQAIELAAQSNHHCHAQKGPDSHCDPKKGKAQRQLYVASAICLLFMIGEVVEILGALVSVLSIWVVTGVLVYLAVERLISGDYEIDGGTMLITSGCAVAVNIIMGLTLHQSGHGHSHGTTNQQEENPSVRAAFIHVIGDFMQSMGVLVAAYILYFKPEYKYVDPICTFVFSILVLGTTLTILRDVILVLMEGTPKGVDFTAVRDLLLSV--EGVEALHSLHIWALTVAQPVLSVHIAIAQNTDAQAVLKTASSRLQGKFHFHTVTIQIEDYSEDMKDCQACQGPSD |
2KGS Chain:A ((92-128)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLIGDFPDEAAKAALMTALNGLLAPGVNVIDQIHVDP-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7741 for 160 contacts (-48.4/contact) +
2D Compatibility (PS) -3457 + (NN) 1509 + (LL) 21816
1D Compatibility (HY) -1200 + (ID) 350
Total energy: 10577.0 ( 66.11 by residue)
QMean score : -0.116
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