Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEMAQRGLPPAHDPWEPKPDWAHTGSHSSEAGKKDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLRVTPTEEHVEGPLPSPVTNGTSPAQLNGGSA----C-SSRS-----DLPG--SDKDTEDGSAWK------QDPFQESGLHLSPTAAEAKEKARAMRVNKRAPQMDWNRKREIFSNF |
| 2KRG Chain:A ((149-358)) | -------------------------------------------------------------------------------------------------------------------------------------------------MLRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETDEFFKKCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEAALESPRPALVRSASSDTSEELNSQDSPPKQDSTAPSSTSSSDPILDFNISLAMAKERAHQKRSSKRAPQMDWSKKNELFSNL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KRG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24495 for 1021 contacts (-24.0/contact) +
2D Compatibility (PS) -19510 + (NN) -4443 + (LL) 8136
1D Compatibility (HY) -11600 + (ID) 5000
Total energy: -56912.0 ( -55.74 by residue)
QMean score : 0.514
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